merge-worktree

Merge changes from worktrees into current branch with selective file checkout, cherry-picking, interactive patch selection, or manual merge

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Install skill "merge-worktree" with this command: npx skills add glennguilloux/context-engineering-kit/glennguilloux-context-engineering-kit-merge-worktree

Claude Command: Merge Worktree

Your job is to help users merge changes from git worktrees into their current branch, supporting multiple merge strategies from simple file checkout to selective cherry-picking.

Instructions

CRITICAL: Perform the following steps exactly as described:

  1. Current state check: Run git worktree list to show all existing worktrees and git status to verify working directory state

  2. Parse user input: Determine what merge operation the user wants:

    • --interactive or no arguments: Guided interactive mode
    • File/directory path: Merge specific file(s) or directory from a worktree
    • Commit name: Cherry-pick a specific commit
    • Branch name: Merge from that branch's worktree
    • --from <worktree>: Specify source worktree explicitly
    • --patch or -p: Use interactive patch selection mode
  3. Determine source worktree/branch: a. If user specified --from <worktree>: Use that worktree path directly b. If user specified a branch name: Find worktree for that branch from git worktree list c. If only one other worktree exists: Ask to confirm using it as source d. If multiple worktrees exist: Present list and ask user which to merge from e. If no other worktrees exist: Explain and offer to use branch-based merge instead

  4. Determine merge strategy: Present options based on user's needs:

    Strategy A: Selective File Checkout (for specific files/directories)

    • Best for: Getting complete file(s) from another branch
    • Command: git checkout <branch> -- <path>

    Strategy B: Interactive Patch Selection (for partial file changes)

    • Best for: Selecting specific hunks/lines from a file
    • Command: git checkout -p <branch> -- <path>
    • Prompts user for each hunk: y (apply), n (skip), s (split), e (edit)

    Strategy C: Cherry-Pick with Selective Staging (for specific commits)

    • Best for: Applying a commit but excluding some changes
    • Steps:
      1. git cherry-pick --no-commit <commit>
      2. Review staged changes
      3. git reset HEAD -- <unwanted-files> to unstage
      4. git checkout -- <unwanted-files> to discard
      5. git commit -m "message"

    Strategy D: Manual Merge with Conflicts (for complex merges)

    • Best for: Full branch merge with control over resolution
    • Steps:
      1. git merge --no-commit <branch>
      2. Review all changes
      3. Selectively stage/unstage files
      4. Resolve conflicts if any
      5. git commit -m "message"

    Strategy E: Multi-Worktree Selective Merge (combining from multiple sources)

    • Best for: Taking different files from different worktrees
    • Steps:
      1. git checkout <branch1> -- <path1>
      2. git checkout <branch2> -- <path2>
      3. git commit -m "Merge selected files from multiple branches"
  5. Execute the selected strategy:

    • Run pre-merge comparison if user wants to review (suggest /git:compare-worktrees first)
    • Execute git commands for the chosen strategy
    • Handle any conflicts that arise
    • Confirm changes before final commit
  6. Post-merge summary: Display what was merged:

    • Files changed/added/removed
    • Source worktree/branch
    • Merge strategy used
  7. Cleanup prompt: After successful merge, ask:

    • "Would you like to remove any worktrees to clean up local state?"
    • If yes: List worktrees and ask which to remove
    • Execute git worktree remove <path> for selected worktrees
    • Remind about git worktree prune if needed

Merge Strategies Reference

StrategyUse WhenCommand Pattern
Selective FileNeed complete file(s) from another branchgit checkout <branch> -- <path>
Interactive PatchNeed specific changes within a filegit checkout -p <branch> -- <path>
Cherry-Pick SelectiveNeed a commit but not all its changesgit cherry-pick --no-commit + selective staging
Manual MergeFull branch merge with controlgit merge --no-commit + selective staging
Multi-SourceCombining files from multiple branchesMultiple git checkout <branch> -- <path>

Examples

Merge single file from worktree:

> /git:merge-worktree src/app.js --from ../project-feature
# Prompts for merge strategy
# Executes: git checkout feature-branch -- src/app.js

Interactive patch selection:

> /git:merge-worktree src/utils.js --patch
# Lists available worktrees to select from
# Runs: git checkout -p feature-branch -- src/utils.js
# User selects hunks interactively (y/n/s/e)

Cherry-pick specific commit:

> /git:merge-worktree abc1234
# Detects commit hash
# Asks: Apply entire commit or selective?
# If selective: git cherry-pick --no-commit abc1234
# Then guides through unstaging unwanted changes

Merge from multiple worktrees:

> /git:merge-worktree --interactive
# "Select files to merge from different worktrees:"
# "From feature-1: src/moduleA.js"
# "From feature-2: src/moduleB.js, src/moduleC.js"
# Executes selective checkouts from each

Full guided mode:

> /git:merge-worktree
# Lists all worktrees
# Asks what to merge (files, commits, or branches)
# Guides through appropriate strategy
# Offers cleanup at end

Directory merge with conflicts:

> /git:merge-worktree src/components/ --from ../project-refactor
# Strategy D: Manual merge with conflicts
# git merge --no-commit refactor-branch
# Helps resolve any conflicts
# Reviews and commits selected changes

Interactive Patch Mode Guide

When using --patch or Strategy B, the user sees prompts for each change hunk:

@@ -10,6 +10,8 @@ function processData(input) {
   const result = transform(input);
+  // Added validation
+  if (!isValid(result)) throw new Error('Invalid');
   return result;
 }
Apply this hunk? [y,n,q,a,d,s,e,?]
KeyAction
yApply this hunk
nSkip this hunk
qQuit (don't apply this or remaining hunks)
aApply this and all remaining hunks
dDon't apply this or remaining hunks in this file
sSplit into smaller hunks
eManually edit the hunk
?Show help

Cherry-Pick Selective Workflow

For Strategy C (cherry-picking with selective staging):

# 1. Apply commit without committing
git cherry-pick --no-commit abc1234

# 2. Check what was staged
git status

# 3. Unstage files you don't want
git reset HEAD -- path/to/unwanted.js

# 4. Discard changes to those files
git checkout -- path/to/unwanted.js

# 5. Commit the remaining changes
git commit -m "Cherry-pick selected changes from abc1234"

Multi-Worktree Merge Workflow

For Strategy E (merging from multiple worktrees):

# Get files from different branches
git checkout feature-auth -- src/auth/login.js src/auth/session.js
git checkout feature-api -- src/api/endpoints.js
git checkout feature-ui -- src/components/Header.js

# Review all changes
git status
git diff --cached

# Commit combined changes
git commit -m "feat: combine auth, API, and UI improvements from feature branches"

Common Workflows

Take a Feature File Without Full Merge

> /git:merge-worktree src/new-feature.js --from ../project-feature
# Gets just the file, not the entire branch

Partial Bugfix from Hotfix Branch

> /git:merge-worktree --patch src/utils.js --from ../project-hotfix
# Select only the specific bug fix hunks, not all changes

Combine Multiple PRs' Changes

> /git:merge-worktree --interactive
# Select specific files from PR-1 worktree
# Select other files from PR-2 worktree
# Combine into single coherent commit

Pre-Merge Review

# First review what will be merged
> /git:compare-worktrees src/module.js
# Then merge with confidence
> /git:merge-worktree src/module.js --from ../project-feature

Important Notes

  • Working directory state: Always ensure your working directory is clean before merging. Uncommitted changes can cause conflicts.

  • Pre-merge review: Consider using /git:compare-worktrees before merging to understand what changes will be applied.

  • Conflict resolution: If conflicts occur during merge, the command will help identify and resolve them before committing.

  • No-commit flag: Most strategies use --no-commit to give you control over the final commit message and what gets included.

  • Shared repository: All worktrees share the same Git object database, so commits made in any worktree are immediately visible to cherry-pick from any other.

  • Branch locks: Remember that branches can only be checked out in one worktree at a time. Use branch names for merge operations rather than creating duplicate worktrees.

Cleanup After Merge

After merging, consider cleaning up worktrees that are no longer needed:

# List worktrees
git worktree list

# Remove specific worktree (clean state required)
git worktree remove ../project-feature

# Force remove (discards uncommitted changes)
git worktree remove --force ../project-feature

# Clean up stale worktree references
git worktree prune

The command will prompt you about cleanup after each successful merge to help maintain a tidy workspace.

Troubleshooting

"Cannot merge: working directory has uncommitted changes"

  • Commit or stash your current changes first
  • Or use git stash before merge, git stash pop after

"Merge conflict in <file>"

  • The command will show conflicted files
  • Open files and resolve conflicts (look for <<<<<<< markers)
  • Stage resolved files with git add <file>
  • Continue with git commit

"Commit not found" when cherry-picking

  • Ensure the commit hash is correct
  • Run git log <branch> in any worktree to find commits
  • Commits are shared across all worktrees

"Cannot checkout: file exists in working tree"

  • File has local modifications
  • Either commit, stash, or discard local changes first
  • Then retry the merge operation

"Branch not found for worktree"

  • The specified worktree may have been removed
  • Run git worktree list to see current worktrees
  • Use git worktree prune to clean up stale references

Integration with Other Commands

Pre-merge review:

> /git:compare-worktrees src/
> /git:merge-worktree src/specific-file.js

Create worktree, merge, cleanup:

> /git:create-worktree feature-branch
> /git:compare-worktrees src/
> /git:merge-worktree src/module.js --from ../project-feature-branch
# After merge, cleanup is offered automatically

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